Summary Statistics
We are releasing the summary data from our meta-analyses of steroid hormones, to empower other researchers to examine variants or loci in which they are interested for association with these hormonal traits. These data are intended for research purposes only.
Citation:
Pott et al. (2019) Genetic Association Study of Eight Steroid Hormones and Implications for Sexual Dimorphism of Coronary Artery Disease. J Clin Endocrinol Metab 104: 5008–5023. PubMed ID: 31169883
When using this data acknowledge the source as follows: 'Data on steroid hormones XXX has been contributed by LIFE-Adult and LIFE-Heart investigators and has been downloaded from https://www.health-atlas.de/assays/27 '
For any enquiries about the datasets, please contact Janne Pott (janne.pott@imise.uni-leipzig.de) or Markus Scholz (markus.scholz@imise.uni-leipzig.de)
Data is available per hormone, each containing statistics regarding the analyses of all samples, men only and women only.
Files are in text delimited format and include:
Markername, chr, bphg19, effectallele, otherallele, effectallelefreq, mininfo, n, beta, se, p (+ CochransQ and pCochransQ, if meta analyzed)
Statistics are based on fixed effect model, if meta analyzed.
Health Atlas ID: 7YREK9VC1R-3
Experimental assay
Projects: Genetical Statistics and Systems Biology, LIFE Adult, LIFE Heart
Investigation: OMICS Investigations
Study: GWAS Steroid Hormones
Resource type: Genome Wide Association
Technology type: SNP Array
Organisms: No organisms
Human Diseases: No human diseases
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Creators and SubmitterViews: 630
Created: 8th Nov 2019 at 10:18
Last updated: 16th Dec 2019 at 08:31
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The group is interested in omic-level studies including the genome, methylome, transcriptome, and metabolome of the general population as well as of various diseases including cardiovascular diseases, pneumonia, sepsis, obesity, and brain cancers. Additionally, we aim at transfering results of biomathematical model simulations into clinical practice e.g. by haematopoietic growth-factor opimization during cytotoxic chemotherapy and optimization of EPO applications in chronic kidney disease.
The
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Programme: This Project is not associated with a Programme
Public web page: http://www.imise.uni-leipzig.de/en/Groups/GenStat/
Start date: 1st Jan 2013
Goal of the Leipzig Research Center for Civilization Diseases (LIFE) is the investigation of civilization diseases like depression, diabetes, allergies or cardiovascular diseases. For this purpose we collect as much data as possible regarding health and living conditions of the population in Leipzig and provide these data for scientists of the University of Leipzig and other research institutions.
The LIFE-Heart study recruited 7,000 patients with suspected coronary heart disease, manifest heart disease or myocardial infarction. All patients received coronary angiography so that the vascular status in the heart is precisely known. In principle, this examination is not feasible in population-related studies. In addition, the patients were thoroughly examined with regard to the general vascular status and the health of the cardiovascular system. Extensive environmental factors were recorded.
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This population-based study examined 10,000 participants randomly selected from the Leipzig population (2011 to 2014). A follow-up is to be carried out from 2017 - 2020. The study mainly included people aged between 40 and 79. All participants underwent a 6-hour study program and people over 60 years of age were invited two more times to in-depth study of cognition and depression and the brain (MRI, EEG). Extensive measurements of genome, metabolome and transcriptome are available. The LIFE-ADULT
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Programme: Epidemiology
Public web page: http://life.uni-leipzig.de/en/adults/life_adult.html
Start date: 1st Jan 2009
Resutls of different OMICS-level using LIFE Adult and LIFE Heart data are presented (Publications, Supplemental Data, & Summary Statistics).
Snapshots: No snapshots
Supplement Data for Publication including Supplement Material & Results (eQTL annotation, Mendelian Randomization (MR), further significant loci), Figures (correlation plot of steroid hormones, scatter plot of genetic effect sizes, regional association plots, scatter plots of MR) and Tables (Correlations, GWAS summary statistics, interaction tests, MR results)
Summary statistics from meta GWAS of cortisol for
- all samples (adjusted for age, log(BMI) and sex)
- men only (adjusted for age and log(BMI))
- women only (adjusted for age and log(BMI))
These data are intended for research purposes only.
Citation:
Pott et al. (2019) Genetic Association Study of Eight Steroid Hormones and Implications for Sexual Dimorphism of Coronary Artery Disease. J Clin Endocrinol Metab 104: 5008–5023. PubMed ID: 31169883
When using this data acknowledge the source as
...
Creator: Janne Pott
Submitter: Janne Pott
Data file type: Other OMICs Data
Relationship type: Not specified
Summary statistics from meta GWAS of DHEAS for
- all samples (adjusted for age, log(BMI) and sex)
- men only (adjusted for age and log(BMI))
- women only (adjusted for age and log(BMI))
These data are intended for research purposes only.
Citation:
Pott et al. (2019) Genetic Association Study of Eight Steroid Hormones and Implications for Sexual Dimorphism of Coronary Artery Disease. J Clin Endocrinol Metab 104: 5008–5023. PubMed ID: 31169883
When using this data acknowledge the source as follows:
...
Creator: Janne Pott
Submitter: Janne Pott
Data file type: Other OMICs Data
Relationship type: Not specified
Summary statistics from meta GWAS of testosterone for
- all samples (adjusted for age, log(BMI) and sex)
- men only (adjusted for age and log(BMI))
- women only (adjusted for age and log(BMI))
These data are intended for research purposes only.
Citation:
Pott et al. (2019) Genetic Association Study of Eight Steroid Hormones and Implications for Sexual Dimorphism of Coronary Artery Disease. J Clin Endocrinol Metab 104: 5008–5023. PubMed ID: 31169883
When using this data acknowledge the source as
...
Creator: Janne Pott
Submitter: Janne Pott
Data file type: Other OMICs Data
Relationship type: Not specified
Summary statistics from meta GWAS of estradiol for
- all samples (adjusted for age, log(BMI) and sex)
- men only (adjusted for age and log(BMI))
- women only (adjusted for age and log(BMI))
These data are intended for research purposes only.
Citation:
Pott et al. (2019) Genetic Association Study of Eight Steroid Hormones and Implications for Sexual Dimorphism of Coronary Artery Disease. J Clin Endocrinol Metab 104: 5008–5023. PubMed ID: 31169883
When using this data acknowledge the source as
...
Creator: Janne Pott
Submitter: Janne Pott
Data file type: Other OMICs Data
Relationship type: Not specified
Summary statistics from meta GWAS of progesterone for
- all samples (adjusted for age, log(BMI) and sex)
- men only (adjusted for age and log(BMI))
- women only (adjusted for age and log(BMI))
These data are intended for research purposes only.
Citation:
Pott et al. (2019) Genetic Association Study of Eight Steroid Hormones and Implications for Sexual Dimorphism of Coronary Artery Disease. J Clin Endocrinol Metab 104: 5008–5023. PubMed ID: 31169883
When using this data acknowledge the source as
...
Creator: Janne Pott
Submitter: Janne Pott
Data file type: Other OMICs Data
Relationship type: Not specified
https://orcid.org/0000-0002-5983-5331
Projects: HaematoOpt - Individualized model-based managing of the next-cycle thrombopenia of CHOEP/CHOP treated patients based on platelets dynamics during the previous cycles, LIFE Heart, LIFE - Leipzig Research Center for Civilization Diseases, Genetical Statistics and Systems Biology, COVID-19 Leipzig
Institutions: Institute for Medical Informatics, Statistics and Epidemiology
Markus Scholz
Scientific Speaker Institution
Institut für Medizinische Informatik, Statistik und Epidemiologie
Universität Leipzig
Härtelstraße 16-18
04107 Leipzig
