Phenotyping means the determination of clinical relevant phenotypes, e.g. by classification or calculation based on EHR data. Within the German Medical Informatics Initiative, the SMITH consortium is working on the implementation of a phenotyping pipeline. to extract, structure and normalize information from the EHR data of the hospital information systems of the participating sites; to automatically apply complex algorithms and models and to enrich the data within the research data warehouses of the distributed data integration centers with the computed results. Here we present the overall picture and essential building blocks and workflows of this concept.
PubMed ID: 31483269
Publication type: Journal
Journal: Stud Health Technol Inform
Human Diseases: No Human Disease specified
Citation: Stud Health Technol Inform. 2019 Sep 3;267:164-172. doi: 10.3233/SHTI190821.
Date Published: 3rd Sep 2019
Registered Mode: by PubMed ID
Created: 29th Jul 2020 at 08:25