Studies
To achieve the objective of Use Case 1, a retrospective study has been performed with data from 5 EU cohorts in different health care settings (hospital, primary care, nursing homes) and health research organizations:
- UNIGE: provides anonymized health care data from the EHR of the University Hospitals of Geneva.
- SAS: provides health care data from the EHR of the Virgen del Rocío University Hospital in Seville as part of the Andalusian Health Service.
- UCSC: provides health ...
Submitter: Matthias Löbe
Investigation: FAIR4Health Pathfinder Case Studies
Resources: Clinical Dataset
Study type: Secondary data analysis
In this study we used the Core Ontology of Phenotypes as general phenotypic model to represent phenotype knowledge. The phenotypes are modelled in so called Phenotype Specification Ontologies.
Submitter: Christoph Beger
Investigation: Phenotype Knowledge Model
Resources: Example Phenotype Specification Ontology for Inclusion Criteria Hyperten...
Study type: Not specified
Submitter: Matthias Löbe
Investigation: FAIR4Health Information Architecture
Resources: 3LGM² local model DIC Leipzig, 3LGM² model survey, 3LGM² reference model, Diagram inter-level relationships
Study type: Not specified
Submitter: Katrin Horn
Investigation: OMICS Investigations
Resources: Gene Expression data, LIFE-Adult EPIC data
Study type: Not specified
Summary statistics of Meta-GWAS results will be made available upon acceptance of our manuscript.
Submitter: Janne Pott
Investigation: OMICS Investigations
Resources: Summary Statistics
Study type: Genetic study
In our manuscript, we describe current procedures, tools, and results to create, compare and qualitatively assess the single-cell transcriptomes of the lung in three different species; human (Homo sapiens), hamster (Mesocricetus auratus), and mice (Mus musculus).
We make the analysis reproducible by publishing the R-based workflow on GitHub pulmonologists_interspecies_scRNA
.
Here in the LHA, we provide the required scRNA-Seq
...
Submitter: Holger Kirsten
Investigation: OMICS Investigations
Resources: scRNA-Seq expression data as RDS Seurat file
Study type: Cell study
Genome-wide Association Meta-Analyses of four steroid hormones (progesterone, 17-OH-progesterone, androstenedione, and aldosterone) and the ratio of testosterone to estradiol. Summary statistics of GWAMA results will be made available upon acceptance of our manuscript.
Submitter: Janne Pott
Investigation: OMICS Investigations
Resources: No Resources
Study type: Genetic study