These reports comprise the SOM portraits in standard and alternative color scales, as well as supporting maps and profiles which provide supplementary information about the 1st level SOM.
Summary page for the individual samples.
Functional analyses using predefined gene sets. The results are visualized in terms of heatmaps, profile plots and population maps.
Sample similarity analyses based on different metrics applied, using the metadata as input.
Different criteria of spot module definition such as overexpression or mutual correlations between the metagenes where applied. The reports comprise integrated portraits, functional analyses.
Analyses based on group-wise aggregated data, including portraits, clustering and functional analyses.
Analyses based on pairwise comparisons, including portraits, clustering and functional analyses.