LHAhpv16classifier - gene expression based predictor of the HPV16 status and of the molecular subgroup (as reported in Wichmann et al. 2015) of head and neck tumor samples

LHA-ID
7R9DE8FDC0-9
Motivation

This package should simplify the translation of the classifications reported in Wichman et al. 2015 to other data sets of head and neck cancers.

Description
Classification of head and neck tumor samples into HPV-positive and negative samples based on their gene expression. Classification of the samples into molecular subgroups reported in Wichmann et al. 2015
Publication Date
Contributors
Sponsor
Leipzig Research Center for Civilization Diseases (LIFE)
University Leipzig
European Union, the European Fund for Regional Development (EFRE)
Free State of Saxony
Contact
Dr. Maciej Rosolowski
Contact Institution

Institute for Medical Informatics, Statistics and Epidemiology (IMISE)
University of Leipzig
Härtelstr. 16-18
04107 Leipzig

Version Number
0.0.9
Required Programs
R-packages: Biobase, rprojroot, knitr, pamr
Programing Language
R
Development Environment
Rstudio
Human Disease Ontology Concept