NLP for Clinical Research Tool
Das NLP4CR-Tool ist ein Prototyp, der die Anwendbarkeit von Apache UIMA und cTakes auf medizinische Volltexte in deutscher Sprache zeigt.
Models & Phenotypes
Obesity of Adults in Leipzig
We mapped anthropometric data the large LIFE Adult population (10,000 participants) onto the Leipzig map. In particular, we derived the body mass index (BMI) taking measured body height and weight int...
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oposSOM
Analysis of large-scale molecular biological data using self-organizing maps
PREMM1,2,6
"PREMM1,2,6" is a logistic regression model. It calculates the risk of having a mutation in the mismatch repair genes MLH1, MSH2 and MSH6 (for single genes and overall) based on the personal and famil...
PREMM5
"PREMM5" is a logistic regression model. It calculates the risk of having a mutation in the mismatch repair genes MLH1, MSH2/EPCAM, MSH6 and PMS2 (for single genes and overall) based on the personal a...
Reference Data for Hand Grip Strength
Based on the large LIFE Adult population (10,000 participants) we generated reference data of hand grip strength using the widely accepted GAMLSS method. These data are the basis for the software appl...
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scrat
We have developed a suite of Single Cell R-Analysis Tools (SCRAT) based on self-organizing maps (SOMs) to deconstruct cellular heterogeneity, reconstruct lineage relationships, and perform gene set en...
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2017-01-05
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Searching for Data Elements in Studies hosted by the LHA
We provide the LHA data portal allowing to searching and accessing data elements in single study or research project and over all studies. The metadata are mapped to public ontologies, such as include...
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Shiny application for managing next-cycle thrombopenia of CHOEP/CHOP treated patients
Fitting available individual patients information, prediction of next-cycle thrombopenia caused by CHOEP treatment based on the individual fits of the preceeding treatment cycles, changing next-cycle ...
Simple Ontology Loader in Drupal (SOLID)
This is a Drupal 8 Module to import nodes and taxonomies into Drupal, using the available API. The module is capable of importing a JSON or OWL file. Idea is to enable users to upload a file containin...