"Sample name" "title" "source name" "organism" "idat file" "characteristics: ID" "characteristics: GENDER" "characteristics: AGE" "characteristics: SMOKING" "characteristics: PACKYEARS" "characteristics: ALCOHOL" "characteristics: TUMOR_TYPE" "characteristics: TUMOR_SITE" "characteristics: UICC_STAGE" "characteristics: T_CATEGORY" "characteristics: N_CATEGORY" "characteristics: DISTANT_METASTASIS" "characteristics: TREATMENT" "characteristics: HPV_DNA" "characteristics: HPV16_DNA_RNA" "characteristics: OS" "characteristics: OS_EVENT" "characteristics: PFS" "characteristics: PFS_EVENT" "characteristics: CONSENSUS_CLUSTER" "characteristics: AKT1_MUTATION" "characteristics: APC_MUTATION" "characteristics: ATM_MUTATION" "characteristics: CDH1_MUTATION" "characteristics: CDKN2A_MUTATION" "characteristics: CSF1R_MUTATION" "characteristics: EGFR_MUTATION" "characteristics: ERBB2_MUTATION" "characteristics: ERBB4_MUTATION" "characteristics: FBXW7_MUTATION" "characteristics: FGFR2_MUTATION" "characteristics: FGFR3_MUTATION" "characteristics: FLT3_MUTATION" "characteristics: GNA11_MUTATION" "characteristics: HRAS_MUTATION" "characteristics: IDH1_MUTATION" "characteristics: JAK3_MUTATION" "characteristics: KIT_MUTATION" "characteristics: NOTCH1_MUTATION" "characteristics: NRAS_MUTATION" "characteristics: PIK3CA_MUTATION" "characteristics: PTEN_MUTATION" "characteristics: RB1_MUTATION" "characteristics: RET_MUTATION" "characteristics: SMAD4_MUTATION" "characteristics: SMO_MUTATION" "characteristics: SRC_MUTATION" "characteristics: STK11_MUTATION" "characteristics: TP53_MUTATION" "characteristics: VHL_MUTATION" "molecule" "label" "description" "platform" "GW_001" "GW_001 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_001 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_001" "F" 59,2772073921971 "No" 0 "1 to 30" "Primary" "Oropharynx" "IVA" "2" "2c" 0 "multi" "HPV16" "DNA+RNA+" 1100 FALSE 1100 FALSE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_003" "GW_003 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_003 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_003" "M" 76,2135523613963 "No" 0 ">60" "Primary" "Oropharynx" "IVA" "2" "2b" 0 "mono" "HPV16" "DNA+RNA+" 1835 FALSE 1771 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_004" "GW_004 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_004 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_004" "M" 64,3915126625599 "Yes" 14 "31 to 60" "Primary" "Oropharynx" "IVA" "2" "2c" 0 "mono" "HPV16" NA 2393 TRUE 2393 TRUE "Atypical IR 1" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_005" "GW_005 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_005 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_005" "M" 66,9322381930185 "No" 0 "1 to 30" "Primary" "Oropharynx" "IVA" "2" "2a" 0 "multi" "HPV16" "DNA+RNA+" 1212 FALSE 1212 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_006" "GW_006 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_006 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_006" "F" 79,0718685831622 "Yes" 2 "1 to 30" "Primary" "Oropharynx" "IVB" "4b" "2b" 0 "multi" "HPV16" "DNA+RNA+" 987 TRUE 987 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_007" "GW_007 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_007 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_007" "F" 46,1327857631759 "Yes" 32 "no" "Primary" "Oropharynx" "IVA" "2" "2c" 0 "multi" "Other HPV" NA 1939 TRUE 1939 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_008" "GW_008 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_008 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_008" "M" 75,2060232717317 "Yes" 45 "1 to 30" "Primary" "Oropharynx" "III" "2" "1" 0 "multi" "Other HPV" NA 1329 FALSE 1329 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_009" "GW_009 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_009 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_009" "M" 56,8980150581793 "No" 0 "1 to 30" "Primary" "Oropharynx" "III" "2" "1" 0 "multi" "Other HPV" NA 941 FALSE 941 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_010" "GW_010 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_010 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_010" "F" 69,0376454483231 "Yes" 30 "no" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 1234 FALSE 1234 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_011" "GW_011 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_011 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_011" "M" 55,8932238193018 "Yes" 30 ">60" "Primary" "Cavum Oris" "II" "2" "0" 0 "multi" "Negative" "DNA-" 1024 FALSE 1024 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_012" "GW_012 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_012 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_012" "M" 50,4777549623546 "Yes" 30 "no" "Primary" "Oropharynx" "II" "2" "0" 0 "multi" "Negative" "DNA-" 884 FALSE 884 FALSE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_013" "GW_013 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_013 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_013" "M" 48,8733744010951 "Yes" 40 "1 to 30" "Primary" "Cavum Oris" "II" "2" "0" 0 "multi" "Negative" "DNA-" 1022 FALSE 1022 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_014" "GW_014 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_014 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_014" "M" 58,7488021902806 "Yes" 40 "1 to 30" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 1073 TRUE 1073 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_015" "GW_015 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_015 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_015" "M" 64,3148528405202 "No" 0 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "HPV16" "DNA+RNA-" 1289 FALSE 1289 FALSE "Atypical IR 1" 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_016" "GW_016 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_016 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_016" "F" 71,5099247091034 "Yes" 50 "31 to 60" "Primary" "Cavum Oris" "III" "3" "0" 0 "multi" "Negative" "DNA-" 1066 TRUE 1066 TRUE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_017" "GW_017 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_017 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_017" "F" 63,0746064339493 "Yes" 70 ">60" "Primary" "Oropharynx" "IVA" "4a" "1" 0 "multi" "Negative" "DNA-" 1038 FALSE 1038 FALSE "Classical 2" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_018" "GW_018 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_018 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_018" "M" 54,2669404517454 "Yes" 40 ">60" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "Other HPV" NA 574 TRUE 472 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_020" "GW_020 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_020 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_020" "M" 63,8521560574949 "Yes" 30 "1 to 30" "Primary" "Oropharynx" "IVC" "4a" "3" 1 "multi" "HPV16" NA 2240 TRUE 2240 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_021" "GW_021 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_021 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_021" "M" 59,2306639288159 "Yes" 20 "1 to 30" "Primary" "Oropharynx" "II" "2" "0" 0 "multi" "HPV16" "DNA+RNA+" 1786 FALSE 1786 FALSE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_022" "GW_022 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_022 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_022" "M" 68,4435318275154 "Yes" 50 "1 to 30" "Primary" "Oropharynx" "IVA" "2" "2a" 0 "mono" "Other HPV" NA 1822 FALSE 1822 FALSE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_023" "GW_023 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_023 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_023" "F" 69,8754277891855 "Yes" 12 "no" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "HPV16" NA 595 TRUE 354 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_025" "GW_025 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_025 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_025" "M" 53,6892539356605 "Yes" 30 ">60" "Primary" "Oropharynx" "IVB" "3" "3" 0 "multi" "HPV16" "DNA+RNA-" 1003 FALSE 1003 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_026" "GW_026 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_026 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_026" "M" 51,5373032169747 "Yes" 10 "1 to 30" "Primary" "Oropharynx" "III" "2" "1" 0 "multi" "HPV16" "DNA+RNA+" 1058 FALSE 1058 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_027" "GW_027 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_027 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_027" "M" 56,7173169062286 "Yes" 40 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "multi" "HPV16" "DNA+RNA+" 1149 FALSE 701 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_028" "GW_028 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_028 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_028" "M" 73,9876796714579 "No" 0 "1 to 30" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "HPV16" "DNA+RNA+" 1249 FALSE 1249 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_029" "GW_029 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_029 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_029" "M" 63,7262149212868 "No" 0 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "multi" "HPV16" "DNA+RNA-" 1435 FALSE 1435 FALSE "Mesenchymal 3" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_030" "GW_030 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_030 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_030" "M" 66,0835044490075 "Yes" 60 "31 to 60" "Primary" "Oropharynx" "III" "2" "1" 0 "multi" "HPV16" "DNA+RNA+" 1254 FALSE 1254 FALSE "Mesenchymal 3" 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_031" "GW_031 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_031 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_031" "F" 56,5229295003422 "Yes" 2 "1 to 30" "Primary" "Oropharynx" "IVA" "3" "2c" 0 "multi" "HPV16" "DNA+RNA+" 1064 FALSE 1064 FALSE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_032" "GW_032 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_032 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_032" "M" 45,7960301163587 "No" 0 "1 to 30" "Primary" "Oropharynx" "IVA" "1" "2b" 0 "multi" "HPV16" "DNA+RNA-" 1724 TRUE 434 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_033" "GW_033 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_033 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_033" "M" 56,6543463381246 "Yes" 35 ">60" "Primary" "Oropharynx" "III" "1" "1" 0 "multi" "HPV16" "DNA+RNA+" 1687 FALSE 1343 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_034" "GW_034 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_034 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_034" "M" 62,5188227241615 "Yes" 40 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "multi" "HPV16" "DNA+RNA-" 473 TRUE 351 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_035" "GW_035 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_035 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_035" "M" 67,6358658453114 "No" 0 "no" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "multi" "HPV16" "DNA+RNA+" 1214 TRUE 1064 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_036" "GW_036 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_036 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_036" "F" 64,3969883641342 "Yes" 8 "1 to 30" "Primary" "Oropharynx" "IVB" "4b" "2c" 0 "multi" "HPV16" "DNA+RNA+" 793 TRUE 793 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_037" "GW_037 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_037 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_037" "M" 56,7967145790554 "Yes" 60 "1 to 30" "Primary" "Oropharynx" "IVA" "1" "2a" 0 "multi" "HPV16" NA 968 TRUE 968 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_038" "GW_038 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_038 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_038" "M" 40,2655715263518 "Yes" NA ">60" "Primary" "Cavum Oris" "II" "2" "0" 0 "multi" "HPV16" "DNA+RNA-" 947 FALSE 947 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_039" "GW_039 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_039 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_039" "F" 52,3258042436687 "No" 0 "1 to 30" "Primary" "Oropharynx" "IVA" "1" "2b" 0 "mono" "HPV16" NA 933 FALSE 933 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_040" "GW_040 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_040 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_040" "M" 60,0301163586585 "Yes" 40 "31 to 60" "Primary" "Oropharynx" "IVA" "2" "2c" 0 "multi" "HPV16" NA 885 FALSE 221 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_041" "GW_041 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_041 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_041" "F" 69,7577002053388 "Yes" 7 "no" "Primary" "Cavum Oris" "IVB" "4a" "3" 0 "multi" "HPV16" "DNA+RNA+" 884 FALSE 884 FALSE "Atypical IR 1" 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_042" "GW_042 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_042 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_042" "M" 50,2505133470226 "Yes" 111 ">60" "Primary" "Oropharynx" "IVB" "4b" "2c" 0 "multi" "HPV16" "DNA+RNA-" 937 FALSE 937 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_043" "GW_043 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_043 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_043" "M" 52,3258042436687 "Yes" 10 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "multi" "Other HPV" NA 1098 TRUE 118 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_044" "GW_044 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_044 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_044" "M" 71,3045859000684 "No" 0 "31 to 60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "mono" "Other HPV" NA 1002 TRUE 428 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_045" "GW_045 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_045 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_045" "F" 52,9226557152635 "Yes" 40 ">60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "multi" "Other HPV" NA 1508 FALSE 1508 FALSE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_046" "GW_046 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_046 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_046" "M" 58,362765229295 "Yes" 40 ">60" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 1191 TRUE 1191 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_047" "GW_047 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_047 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_047" "M" 46,5188227241615 "Yes" 35 "no" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 1137 FALSE 1137 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_049" "GW_049 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_049 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_049" "M" 59,0198494182067 "Yes" 60 "31 to 60" "Primary" "Larynx" "IVB" "2" "3" 0 "multi" "Negative" "DNA-" 1281 TRUE 1281 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_051" "GW_051 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_051 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_051" "M" 57,7604380561259 "Yes" 50 ">60" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "mono" "Negative" "DNA-" 753 TRUE 443 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_052" "GW_052 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_052 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_052" "M" 51,4579055441478 "Yes" 35 ">60" "Secondary" "Hypopharynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 1052 FALSE 463 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_053" "GW_053 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_053 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_053" "M" 47,6495550992471 "Yes" 12 ">60" "Primary" "Oropharynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 1150 TRUE 322 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_054" "GW_054 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_054 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_054" "M" 48,5585215605749 "Yes" 35 ">60" "Primary" "Oropharynx" "IVA" "1" "2a" 0 "multi" "Negative" "DNA-" 1270 TRUE 1270 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_056" "GW_056 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_056 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_056" "M" 68,6899383983573 "Yes" 45 "1 to 30" "Primary" "Cavum Oris" "II" "2" "0" 0 "multi" "Negative" "DNA-" 2029 FALSE 2001 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_057" "GW_057 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_057 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_057" "M" 59,7754962354552 "Yes" 48 ">60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 267 TRUE 267 TRUE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_058" "GW_058 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_058 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_058" "M" 51,0992470910335 "Yes" 30 "1 to 30" "Primary" "Oropharynx" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 1219 FALSE 1219 FALSE "Classical 2" 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_059" "GW_059 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_059 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_059" "M" 65,4182067077344 "Yes" 125 "31 to 60" "Primary" "Oropharynx" "IVA" "4a" "0" 0 "mono" "Negative" "DNA-" 1074 FALSE 143 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_060" "GW_060 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_060 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_060" "F" 78,0643394934976 "Yes" 50 ">60" "Primary" "Cavum Oris" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1179 TRUE 1179 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_061" "GW_061 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_061 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_061" "F" 70,4941820670773 "No" 0 "no" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 1066 TRUE 304 TRUE "Basal 4" 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_062" "GW_062 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_062 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_062" "M" 54,0451745379877 "Yes" 30 ">60" "Primary" "Oropharynx" "III" "3" "1" 0 "multi" "Negative" "DNA-" 1717 FALSE 1717 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_063" "GW_063 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_063 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_063" "M" 43,1895961670089 "Yes" 30 ">60" "Primary" "Cavum Oris" "III" "2" "1" 0 "multi" "Negative" "DNA-" 2059 FALSE 2059 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_064" "GW_064 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_064 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_064" "M" 68,227241615332 "No" 0 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "mono" "Negative" "DNA-" 177 TRUE 177 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_065" "GW_065 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_065 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_065" "M" 69,2511978097194 "Yes" 40 "31 to 60" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 274 TRUE 257 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_066" "GW_066 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_066 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_066" "M" 54,009582477755 "Yes" 35 "31 to 60" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "Negative" "DNA-" 1962 TRUE 1711 TRUE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_067" "GW_067 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_067 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_067" "M" 56,9883641341547 "Yes" 41 ">60" "Primary" "Oropharynx" "II" "2" "0" 0 "multi" "Negative" "DNA-" 2001 FALSE 2001 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_068" "GW_068 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_068 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_068" "M" 50,8090349075975 "Yes" 30 ">60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 1597 FALSE 1042 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_069" "GW_069 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_069 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_069" "M" 49,0047912388775 "Yes" 30 "31 to 60" "Primary" "Cavum Oris" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 945 FALSE 945 FALSE "Basal 4" 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_070" "GW_070 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_070 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_070" "F" 69,7987679671458 "No" 0 "no" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 974 FALSE 974 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_071" "GW_071 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_071 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_071" "F" 59,0691307323751 "Yes" 33 "1 to 30" "Primary" "Oropharynx" "IVA" "1" "2b" 0 "multi" "Negative" "DNA-" 1002 FALSE 1002 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_072" "GW_072 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_072 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_072" "F" 50,6447638603696 "Yes" 15 ">60" "Primary" "Cavum Oris" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 1016 FALSE 1016 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_073" "GW_073 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_073 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_073" "M" 52,829568788501 "Yes" 36 ">60" "Primary" "Oropharynx" "IVA" "4a" "2a" 0 "multi" "Negative" "DNA-" 1004 FALSE 1004 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_074" "GW_074 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_074 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_074" "M" 87,4086242299795 "No" 0 "no" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "palliative" "Negative" "DNA-" 1002 TRUE 1002 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_075" "GW_075 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_075 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_075" "M" 56,788501026694 "Yes" 40 "1 to 30" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 982 FALSE 982 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_076" "GW_076 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_076 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_076" "M" 56,7693360711841 "Yes" 40 ">60" "Primary" "Cavum Oris" "II" "2" "0" 0 "mono" "Negative" "DNA-" 961 FALSE 507 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_077" "GW_077 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_077 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_077" "M" 64,5338809034908 "Yes" 75 "31 to 60" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "Negative" "DNA-" 954 FALSE 954 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_078" "GW_078 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_078 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_078" "F" 52,5694729637235 "Yes" 30 "no" "Primary" "Cavum Oris" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 951 TRUE 503 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_079" "GW_079 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_079 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_079" "M" 56,8624229979466 "Yes" 40 ">60" "Primary" "Oropharynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 944 FALSE 517 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_080" "GW_080 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_080 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_080" "M" 67,3292265571526 "Yes" 30 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "1" 0 "multi" "Negative" "DNA-" 941 FALSE 941 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_081" "GW_081 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_081 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_081" "M" 48,1752224503765 "Yes" 35 ">60" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 906 TRUE 394 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_082" "GW_082 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_082 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_082" "M" 54,1327857631759 "Yes" 30 ">60" "Primary" "Cavum Oris" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 927 FALSE 864 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_083" "GW_083 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_083 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_083" "M" 61,347022587269 "No" 0 ">60" "Primary" "Oropharynx" "IVB" "1" "3" 0 "multi" "Negative" "DNA-" 896 FALSE 285 TRUE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_084" "GW_084 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_084 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_084" "M" 40,0465434633812 "Yes" 17 ">60" "Primary" "Cavum Oris" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 903 TRUE 279 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_085" "GW_085 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_085 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_085" "M" 58,9267624914442 "Yes" 31 "1 to 30" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 875 FALSE 875 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_086" "GW_086 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_086 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_086" "M" 77,1170431211499 "Yes" 45 "31 to 60" "Primary" "Larynx" "IVA" "4a" "2c" 0 "mono" "Negative" "DNA-" 906 FALSE 906 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_087" "GW_087 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_087 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_087" "M" 68,3175906913073 "Yes" 48 "no" "Primary" "Hypopharynx" "III" "3" "1" 0 "multi" "Negative" "DNA-" 1808 TRUE 468 TRUE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_088" "GW_088 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_088 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_088" "M" 58,0177960301164 "Yes" 15 "no" "Primary" "Oropharynx" "IVA" "2" "2b" 0 "multi" "HPV16" "DNA+RNA+" 1837 FALSE 1837 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_089" "GW_089 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_089 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_089" "M" 55,7070499657769 "Yes" 30 ">60" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "multi" NA NA 304 TRUE 287 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_091" "GW_091 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_091 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_091" "M" 63,5099247091034 "Yes" 76 ">60" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 652 TRUE 346 TRUE "Mesenchymal 3" 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_092" "GW_092 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_092 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_092" "M" 61,223819301848 "Yes" 40 ">60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 2033 TRUE 228 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_093" "GW_093 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_093 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_093" "M" 57,1471594798084 "Yes" 60 ">60" "Primary" "Oropharynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 1827 FALSE 1827 FALSE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_094" "GW_094 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_094 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_094" "M" 51,192334017796 "Yes" 30 ">60" "Primary" "Oropharynx" "IVA" "3" "2c" 0 "mono" "Other HPV" NA 1872 TRUE 136 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_095" "GW_095 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_095 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_095" "F" 70,0971937029432 "No" 0 "no" "Primary" "Oropharynx" "II" "2" "0" 0 "mono" "HPV16" "DNA+RNA+" 2025 FALSE 2025 FALSE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_096" "GW_096 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_096 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_096" "F" 55,6440793976728 "Yes" 10 "1 to 30" "Primary" "Oropharynx" "III" "2" "1" 0 "multi" "HPV16" "DNA+RNA+" 1855 FALSE 1855 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_097" "GW_097 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_097 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_097" "F" 56,3969883641342 "Yes" 28 ">60" "Primary" "Oropharynx" "III" "3" "1" 0 "multi" "Negative" "DNA-" 2310 FALSE 2310 FALSE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_101" "GW_101 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_101 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_101" "M" 69,0951403148528 "No" 0 "no" "Secondary" "Larynx" "II" "2" "0" 0 "multi" "Negative" "DNA-" 499 TRUE 499 TRUE "Classical 2" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_102" "GW_102 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_102 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_102" "M" 40,394250513347 "Yes" 7 ">60" "Primary" "Hypopharynx" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 679 TRUE 569 TRUE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_103" "GW_103 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_103 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_103" "M" 77,409993155373 "No" 0 "31 to 60" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1099 FALSE 166 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_104" "GW_104 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_104 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_104" "M" 71,668720054757 "Yes" 45 "31 to 60" "Primary" "Hypopharynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1219 FALSE 1219 FALSE "Mesenchymal 3" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_105" "GW_105 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_105 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_105" "M" 52,4271047227926 "Yes" 30 ">60" "Primary" "Larynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 1904 FALSE 1904 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_106" "GW_106 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_106 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_106" "M" 49,2566735112936 "Yes" 45 ">60" "Primary" "Hypopharynx" "IVC" "4a" "2c" 1 "multi" "Negative" "DNA-" 23 TRUE 23 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_107" "GW_107 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_107 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_107" "M" 44,4599589322382 "Yes" 30 "31 to 60" "Primary" "Oropharynx" "I" "1" "0" 0 "multi" "Negative" "DNA-" 1176 FALSE 846 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 1 "total RNA" "biotin" "" "GPL10558" "GW_108" "GW_108 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_108 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_108" "M" 72,6680355920602 "Yes" 25 "1 to 30" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1147 FALSE 1147 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_109" "GW_109 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_109 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_109" "F" 70,4093086926762 "No" 0 "1 to 30" "Primary" "Cavum Oris" "III" "1" "1" 0 "multi" "Negative" "DNA-" 1178 FALSE 1178 FALSE "Mesenchymal 3" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_110" "GW_110 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_110 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_110" "M" 63,2005475701574 "No" 0 "31 to 60" "Primary" "Oropharynx" "IVA" "1" "2b" 0 "multi" "HPV16" "DNA+RNA+" 1123 FALSE 1123 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_111" "GW_111 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_111 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_111" "M" 67,4496919917865 "Yes" 50 "31 to 60" "Primary" "Larynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 1051 FALSE 1051 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_112" "GW_112 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_112 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_112" "M" 74,0396988364134 "Yes" 30 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "1" 0 "multi" "Negative" "DNA-" 1184 FALSE 1184 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_113" "GW_113 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_113 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_113" "M" 60,0328542094456 "Yes" 16 "1 to 30" "Primary" "Larynx" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 1192 FALSE 1192 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_115" "GW_115 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_115 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_115" "M" 56,9144421629021 "Yes" 25 ">60" "Primary" "Larynx" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 1808 FALSE 1808 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_116" "GW_116 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_116 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_116" "M" 69,2950034223135 "Yes" 30 ">60" "Primary" "Larynx" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 1332 FALSE 1332 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_117" "GW_117 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_117 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_117" "M" 69,7248459958932 "Yes" 50 "1 to 30" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1305 FALSE 1305 FALSE "Mesenchymal 3" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_118" "GW_118 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_118 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_118" "M" 57,9082819986311 "Yes" 40 "1 to 30" "Primary" "Hypopharynx" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 1024 FALSE 1024 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_119" "GW_119 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_119 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_119" "M" 54,1601642710472 "Yes" 15 ">60" "Primary" "Hypopharynx" "III" "3" "1" 0 "multi" "Negative" "DNA-" 1060 FALSE 1060 FALSE "Atypical IR 1" 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_120" "GW_120 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_120 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_120" "F" 68,3203285420945 "No" 0 "1 to 30" "Primary" "Hypopharynx" "IVA" "4a" "1" 0 "multi" "Negative" "DNA-" 602 TRUE 602 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_122" "GW_122 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_122 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_122" "M" 77,284052019165 "Yes" 80 "31 to 60" "Primary" "Cavum Oris" "II" "2" "0" 0 "multi" "Negative" "DNA-" 831 TRUE 484 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_123" "GW_123 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_123 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_123" "M" 50,2943189596167 "Yes" 30 "1 to 30" "Primary" "Hypopharynx" "III" "2" "1" 0 "multi" "Negative" "DNA-" 1067 FALSE 1067 FALSE "Basal 4" 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_124" "GW_124 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_124 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_124" "M" 80,2710472279261 "Yes" 65 "31 to 60" "Primary" "Larynx" "I" "1" "0" 0 "mono" "Negative" "DNA-" 118 TRUE 118 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_125" "GW_125 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_125 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_125" "F" 56,5667351129363 "No" 0 "no" "Primary" "Larynx" "IVA" "3" "2b" 0 "multi" "HPV16" "DNA+RNA-" 1107 FALSE 1107 FALSE "Classical 2" 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_126" "GW_126 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_126 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_126" "M" 52,3340177960301 "Yes" 45 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 954 FALSE 954 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_127" "GW_127 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_127 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_127" "M" 68,1095140314853 "Yes" 20 "1 to 30" "Primary" "Cavum Oris" "III" "1" "1" 0 "multi" "Negative" "DNA-" 834 FALSE 834 FALSE "Basal 4" 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_128" "GW_128 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_128 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_128" "M" 55,3483915126626 "Yes" 40 ">60" "Primary" "Larynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 253 TRUE 253 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_129" "GW_129 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_129 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_129" "F" 58,1957563312799 "Yes" 30 "1 to 30" "Primary" "Larynx" "IVA" "4a" "2c" 0 "multi" "HPV16" "DNA+RNA+" 1252 FALSE 1252 FALSE "Basal 4" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_130" "GW_130 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_130 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_130" "M" 74,8117727583847 "No" 0 "1 to 30" "Primary" "Larynx" "IVC" "4a" "1" 1 "multi" "Negative" "DNA-" 521 TRUE 457 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_131" "GW_131 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_131 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_131" "M" 51,2826830937714 "Yes" 35 ">60" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 968 FALSE 968 FALSE "Mesenchymal 3" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_133" "GW_133 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_133 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_133" "M" 55,1238877481177 "Yes" 39 "31 to 60" "Primary" "Larynx" "IVB" "3" "3" 0 "multi" "Negative" "DNA-" 429 TRUE 429 TRUE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_134" "GW_134 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_134 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_134" "M" 70,6830937713895 "Yes" 20 "1 to 30" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1211 FALSE 1211 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_135" "GW_135 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_135 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_135" "M" 60,0684462696783 "Yes" 45 ">60" "Primary" "Larynx" "I" "1" "0" 0 "mono" "Negative" "DNA-" 1182 FALSE 67 TRUE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_136" "GW_136 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_136 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_136" "M" 81,7659137577002 "No" 0 "1 to 30" "Primary" "Hypopharynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 582 TRUE 561 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_137" "GW_137 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_137 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_137" "M" 52,4052019164955 "Yes" 30 ">60" "Primary" "Hypopharynx" "III" "2" "1" 0 "multi" "Negative" "DNA-" 996 FALSE 996 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_138" "GW_138 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_138 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_138" "M" 61,9767282683094 "Yes" 60 ">60" "Primary" "Hypopharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 979 FALSE 979 FALSE "Mesenchymal 3" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_139" "GW_139 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_139 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_139" "M" 56,2956878850103 "Yes" 70 ">60" "Primary" "Larynx" "I" "1" "0" 0 "mono" "Negative" "DNA-" 1043 FALSE 1043 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_140" "GW_140 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_140 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_140" "M" 58,6146475017112 "Yes" NA "1 to 30" "Primary" "Larynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 1270 TRUE 674 TRUE "Atypical IR 1" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_141" "GW_141 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_141 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_141" "M" 67,0636550308008 "No" 0 "1 to 30" "Primary" "Larynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 885 FALSE 885 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_142" "GW_142 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_142 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_142" "M" 57,1334702258727 "Yes" 60 ">60" "Primary" "Larynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 1185 FALSE 1185 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_143" "GW_143 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_143 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_143" "M" 58,9349760438056 "Yes" 60 ">60" "Primary" "Hypopharynx" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 811 TRUE 811 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_144" "GW_144 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_144 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_144" "M" 65,6454483230664 "Yes" 45 "31 to 60" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1024 FALSE 1024 FALSE "Mesenchymal 3" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_145" "GW_145 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_145 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_145" "M" 44,7227926078029 "Yes" 50 ">60" "Primary" "Larynx" "IVA" "3" "2b" 0 "mono" "Negative" "DNA-" 856 FALSE 733 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_146" "GW_146 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_146 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_146" "M" 51,6495550992471 "Yes" 33 ">60" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "Negative" "DNA-" 1017 FALSE 1017 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_147" "GW_147 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_147 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_147" "F" 72,5201916495551 "No" 0 "1 to 30" "Primary" "Oropharynx" "IVA" "3" "2c" 0 "multi" "HPV16" "DNA+RNA-" 489 TRUE 489 TRUE "Atypical IR 1" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_148" "GW_148 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_148 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_148" "M" 64,4161533196441 "Yes" 50 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 1057 FALSE 468 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_149" "GW_149 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_149 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_149" "M" 55,9534565366188 "Yes" 40 "1 to 30" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "mono" "Other HPV" NA 1057 TRUE 188 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_150" "GW_150 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_150 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_150" "M" 70,7132101300479 "Yes" 55 ">60" "Primary" "Cavum Oris" "II" "2" "0" 0 "multi" "Negative" "DNA-" 1009 TRUE 1009 TRUE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_151" "GW_151 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_151 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_151" "M" 53,8945927446954 "Yes" 40 ">60" "Primary" "Cavum Oris" "III" "3" "0" 0 "mono" "HPV16" "DNA+RNA-" 1107 FALSE 1008 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_152" "GW_152 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_152 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_152" "M" 48,8268309377139 "Yes" 45 ">60" "Primary" "Cavum Oris" "II" "2" "0" 0 "mono" "HPV16" "DNA+RNA+" 875 FALSE 875 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_153" "GW_153 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_153 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_153" "M" 42,7898699520876 "No" 0 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 689 TRUE 622 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_154" "GW_154 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_154 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_154" "M" 56,9637234770705 "No" 0 ">60" "Primary" "Cavum Oris" "IVC" "4a" "2a" 1 "mono" "Negative" "DNA-" 275 TRUE 275 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_155" "GW_155 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_155 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_155" "M" 44,6269678302532 "Yes" 25 ">60" "Primary" "Hypopharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 631 TRUE 531 TRUE "Mesenchymal 3" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_156" "GW_156 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_156 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_156" "M" 66,4531143052704 "Yes" 10 "31 to 60" "Primary" "Cavum Oris" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 1365 FALSE 1365 FALSE "Basal 4" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_157" "GW_157 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_157 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_157" "M" 56,9472963723477 "Yes" 40 "31 to 60" "Primary" "Hypopharynx" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 815 FALSE 815 FALSE "Atypical IR 1" 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_158" "GW_158 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_158 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_158" "M" 68,331279945243 "Yes" 50 "31 to 60" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "Negative" "DNA-" 793 FALSE 793 FALSE "Mesenchymal 3" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_159" "GW_159 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_159 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_159" "M" 77,6919917864476 "No" 0 "31 to 60" "Primary" "Hypopharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 356 TRUE 356 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_160" "GW_160 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_160 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_160" "M" 64,5092402464066 "Yes" 60 "no" "Primary" "Larynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 794 FALSE 794 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_163" "GW_163 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_163 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_163" "F" 44,3066392881588 "Yes" 10 "1 to 30" "Primary" "Cavum Oris" "I" "1" "0" 0 "multi" "Negative" "DNA-" 793 FALSE 309 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_164" "GW_164 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_164 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_164" "M" 70,9815195071869 "Yes" 48 "31 to 60" "Primary" "Larynx" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 272 TRUE 272 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_165" "GW_165 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_165 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_165" "M" 55,854893908282 "Yes" 30 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 1025 FALSE 1025 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_166" "GW_166 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_166 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_166" "M" 52,621492128679 "Yes" 35 ">60" "Primary" "Oropharynx" "III" "1" "1" 0 "mono" "HPV16" "DNA+RNA-" 734 FALSE 434 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_167" "GW_167 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_167 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_167" "M" 72,1122518822724 "Yes" 15 "1 to 30" "Primary" "Oropharynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 846 FALSE 846 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_168" "GW_168 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_168 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_168" "M" 83,482546201232 "No" 0 "no" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 713 FALSE 713 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_169" "GW_169 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_169 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_169" "M" 77,0458590006845 "Yes" 60 "1 to 30" "Primary" "Hypopharynx" "III" "2" "1" 0 "mono" "Negative" "DNA-" 1245 FALSE 1245 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_170" "GW_170 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_170 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_170" "M" 54,3956194387406 "Yes" 35 "1 to 30" "Primary" "Oropharynx" "IVA" "4a" "0" 0 "mono" "HPV16" "DNA+RNA+" 725 TRUE 426 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_171" "GW_171 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_171 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_171" "F" 52,6817248459959 "Yes" 3 "1 to 30" "Primary" "Larynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 755 FALSE 755 FALSE "Classical 2" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_172" "GW_172 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_172 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_172" "M" 45,7604380561259 "Yes" 33 "31 to 60" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "Negative" "DNA-" 758 FALSE 196 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_173" "GW_173 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_173 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_173" "M" 72,7419575633128 "Yes" 45 "31 to 60" "Primary" "Larynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 417 TRUE 353 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_174" "GW_174 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_174 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_174" "F" 50,2642026009582 "No" 0 "no" "Primary" NA "III" "3" "1" 0 "multi" "Negative" "DNA-" 1291 FALSE 1291 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_175" "GW_175 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_175 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_175" "M" 73,0321697467488 "Yes" 20 "1 to 30" "Primary" "Hypopharynx" "IVA" "4a" "1" 0 "mono" "Negative" "DNA-" 269 TRUE 269 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_177" "GW_177 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_177 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_177" "M" 61,6454483230664 "Yes" 40 "1 to 30" "Primary" "Larynx" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 730 FALSE 730 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_178" "GW_178 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_178 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_178" "M" 62,7597535934292 "Yes" 55 "31 to 60" "Primary" "Hypopharynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 882 FALSE 882 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_179" "GW_179 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_179 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_179" "M" 59,170431211499 "Yes" 25 "1 to 30" "Primary" "Hypopharynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 764 FALSE 764 FALSE "Basal 4" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_180" "GW_180 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_180 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_180" "M" 56,5749486652977 "Yes" 50 ">60" "Primary" "Oropharynx" "IVA" "2" "2a" 0 "multi" "Negative" "DNA-" 1059 FALSE 700 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_181" "GW_181 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_181 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_181" "M" 61,8535249828884 "Yes" 112,5 ">60" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 743 FALSE 743 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_182" "GW_182 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_182 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_182" "M" 57,0759753593429 "Yes" 41 ">60" "Primary" "Cavum Oris" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 257 TRUE 257 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_183" "GW_183 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_183 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_183" "M" 77,7987679671458 "Yes" 20 ">60" "Primary" "Larynx" "I" "1" "0" 0 "mono" "Negative" "DNA-" 617 TRUE 609 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_184" "GW_184 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_184 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_184" "M" 55,7590691307324 "Yes" 25 ">60" "Primary" "Larynx" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 120 TRUE 120 TRUE "Mesenchymal 3" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_185" "GW_185 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_185 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_185" "M" 57,678302532512 "Yes" 50 "31 to 60" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 1162 FALSE 1162 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_186" "GW_186 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_186 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_186" "M" 69,7987679671458 "Yes" 38 "31 to 60" "Primary" "Larynx" "IVA" "4a" "0" 0 "mono" "Negative" "DNA-" 758 FALSE 758 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_187" "GW_187 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_187 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_187" "M" 45,3497604380561 "No" 0 "31 to 60" "Primary" "Cavum Oris" "II" "2" "0" 0 "mono" "Negative" "DNA-" 765 FALSE 765 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_188" "GW_188 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_188 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_188" "M" 50,1601642710472 "Yes" 35 "1 to 30" "Primary" "Larynx" "IVA" "3" "2c" 0 "mono" "Negative" "DNA-" 146 TRUE 146 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_189" "GW_189 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_189 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_189" "M" 59,62765229295 "Yes" 40 "31 to 60" "Primary" "Hypopharynx" "IVB" "4a" "3" 0 "multi" "Negative" "DNA-" 209 TRUE 209 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_190" "GW_190 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_190 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_190" "M" 74,6967830253251 "No" 0 ">60" "Primary" "Larynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 769 FALSE 769 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_191" "GW_191 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_191 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_191" "M" 52,1286789869952 "Yes" 42 ">60" "Primary" "Larynx" "I" "1" "0" 0 "mono" "HPV16" "DNA+RNA-" 785 FALSE 785 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_192" "GW_192 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_192 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_192" "M" 42,6776180698152 "Yes" 35 ">60" "Primary" "Hypopharynx" "III" "2" "1" 0 "multi" "Negative" "DNA-" 843 FALSE 843 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_193" "GW_193 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_193 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_193" "M" 76,5503080082135 "Yes" 50 "1 to 30" "Primary" "Larynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 826 FALSE 826 FALSE "Basal 4" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_196" "GW_196 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_196 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_196" "M" 57,4592744695414 "Yes" 45 ">60" "Primary" "Hypopharynx" "IVB" "2" "3" 0 "multi" "Negative" "DNA-" 258 TRUE 258 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_197" "GW_197 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_197 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_197" "M" 48,2956878850103 "Yes" 20 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "mono" "Negative" "DNA-" 139 TRUE 115 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_198" "GW_198 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_198 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_198" "M" 46,9267624914442 "Yes" 15 ">60" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 710 FALSE 710 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_199" "GW_199 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_199 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_199" "M" 50,6639288158795 "Yes" 35 "31 to 60" "Primary" "Hypopharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 769 FALSE 769 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_200" "GW_200 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_200 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_200" "F" 70,9979466119097 "Yes" 9 "1 to 30" "Primary" "Cavum Oris" "IVC" "2" "2c" 1 "multi" "Negative" "DNA-" 305 TRUE 92 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_201" "GW_201 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_201 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_201" "M" 52,0520191649555 "Yes" 35 ">60" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 871 FALSE 871 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_202" "GW_202 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_202 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_202" "M" 76,3504449007529 "Yes" 50 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "mono" "Negative" "DNA-" 466 TRUE 283 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_203" "GW_203 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_203 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_203" "M" 61,1060917180014 "Yes" 90 "31 to 60" "Primary" "Oropharynx" "IVA" "1" "2c" 0 "multi" "HPV16" "DNA+RNA-" 855 FALSE 855 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_204" "GW_204 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_204 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_204" "M" 47,1594798083504 "No" 0 ">60" "Primary" "Cavum Oris" "IVA" "4a" "1" 0 "multi" "Negative" "DNA-" 857 FALSE 857 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_205" "GW_205 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_205 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_205" "M" 58,2833675564682 "No" 0 "no" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "HPV16" "DNA+RNA+" 840 FALSE 840 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_206" "GW_206 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_206 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_206" "M" 53,6536618754278 "Yes" 60 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 147 TRUE 147 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_207" "GW_207 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_207 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_207" "M" 51,8850102669405 "Yes" 15 "1 to 30" "Primary" "Cavum Oris" "IVB" "4b" "3" 0 "mono" "Negative" "DNA-" 182 TRUE 124 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_209" "GW_209 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_209 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_209" "M" 48,8980150581793 "Yes" 30 ">60" "Primary" "Cavum Oris" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 825 FALSE 825 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_210" "GW_210 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_210 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_210" "M" 56,3613963039014 "Yes" 20 ">60" "Primary" "Oropharynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 790 FALSE 601 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_211" "GW_211 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_211 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_211" "F" 53,9110198494182 "Yes" 10 "1 to 30" "Primary" "Oropharynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 877 FALSE 539 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_212" "GW_212 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_212 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_212" "M" 75,709787816564 "Yes" 120 "31 to 60" "Primary" "Oropharynx" "IVA" "2" "2b" 0 "multi" "HPV16" "DNA+RNA+" 813 FALSE 568 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_214" "GW_214 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_214 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_214" "M" 58,6803559206023 "Yes" 60 ">60" "Primary" "Oropharynx" "IVA" "3" "2c" 0 "multi" "HPV16" "DNA+RNA+" 268 TRUE 239 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_215" "GW_215 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_215 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_215" "M" 48,8158795345654 "Yes" 24 "31 to 60" "Primary" "Oropharynx" "IVA" "2" "2b" 0 "multi" "HPV16" "DNA+RNA+" 785 FALSE 785 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_216" "GW_216 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_216 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_216" "M" 56,3394934976044 "Yes" 13 "1 to 30" "Primary" "Oropharynx" "IVA" "2" "2c" 0 "mono" "Other HPV" NA 777 FALSE 777 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_217" "GW_217 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_217 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_217" "M" 62,1409993155373 "No" 0 "1 to 30" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "HPV16" "DNA+RNA+" 778 FALSE 778 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_218" "GW_218 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_218 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_218" "F" 75,3839835728953 "No" 0 "1 to 30" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "HPV16" "DNA+RNA-" 787 FALSE 787 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_219" "GW_219 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_219 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_219" "M" 48,2984257357974 "Yes" 20 "no" "Primary" "Oropharynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 750 FALSE 750 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_220" "GW_220 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_220 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_220" "M" 66,0506502395619 "Yes" 35 "1 to 30" "Primary" "Oropharynx" "IVA" "4a" "2a" 0 "multi" "Negative" "DNA-" 324 TRUE 324 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_221" "GW_221 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_221 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_221" "M" 44,3039014373717 "Yes" 15 "31 to 60" "Primary" "Oropharynx" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 1115 FALSE 653 TRUE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_222" "GW_222 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_222 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_222" "M" 52,4298425735797 "Yes" 40 "31 to 60" "Primary" "Cavum Oris" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 279 TRUE 279 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_223" "GW_223 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_223 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_223" "M" 48,3613963039014 "Yes" 35 ">60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 741 FALSE 405 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_224" "GW_224 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_224 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_224" "M" 70,4010951403149 "Yes" 15 "1 to 30" "Primary" "Cavum Oris" "IVA" "2" "2b" 0 "multi" "HPV16" "DNA+RNA+" 764 FALSE 764 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_225" "GW_225 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_225 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_225" "M" 57,8370978781656 "Yes" 45 ">60" "Primary" "Cavum Oris" "III" "2" "1" 0 "multi" "Negative" "DNA-" 769 FALSE 769 FALSE "Classical 2" 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_226" "GW_226 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_226 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_226" "F" 35,3401779603012 "Yes" 4 "1 to 30" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "Negative" "DNA-" 751 FALSE 751 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_227" "GW_227 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_227 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_227" "F" 82,0889801505818 "No" 0 "no" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "mono" "Negative" "DNA-" 212 TRUE 158 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_228" "GW_228 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_228 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_228" "M" 68,1505817932923 "Yes" 40 ">60" "Primary" "Oropharynx" "IVB" "3" "3" 0 "mono" "Negative" "DNA-" 325 TRUE 325 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_229" "GW_229 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_229 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_229" "F" 59,0417522245038 "Yes" 22,5 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 616 TRUE 616 TRUE "Mesenchymal 3" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_230" "GW_230 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_230 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_230" "M" 61,1416837782341 "Yes" 30 ">60" "Primary" "Oropharynx" "IVA" "2" "2b" 0 "mono" "HPV16" "DNA+RNA+" 776 FALSE 776 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_231" "GW_231 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_231 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_231" "M" 70,0862422997947 "Yes" 50 "no" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "Negative" "DNA-" 825 FALSE 825 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_233" "GW_233 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_233 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_233" "M" 58,6639288158795 "Yes" 75 "1 to 30" "Primary" "Oropharynx" "IVA" "2" "2c" 0 "multi" "Negative" "DNA-" 1357 FALSE 1357 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_234" "GW_234 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_234 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_234" "F" 46,5106091718001 "Yes" 68 ">60" "Primary" "Cavum Oris" "IVA" "3" "2c" 0 "multi" "Negative" "DNA-" 1063 TRUE 1035 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_235" "GW_235 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_235 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_235" "M" 59,4004106776181 "Yes" 55 ">60" "Primary" "Cavum Oris" "IVA" "4a" "2b" 0 "mono" "Negative" "DNA-" 294 TRUE 157 TRUE "Basal 4" 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_236" "GW_236 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_236 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_236" "M" 53,2731006160164 "Yes" 30 "31 to 60" "Primary" "Cavum Oris" "I" "1" "0" 0 "mono" "Negative" "DNA-" 680 FALSE 680 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_237" "GW_237 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_237 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_237" "M" 74,943189596167 "Yes" 40 "no" "Primary" "Oropharynx" "IVB" "4b" "2c" 0 "mono" "HPV16" "DNA+RNA+" 689 FALSE 142 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_238" "GW_238 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_238 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_238" "F" 59,8932238193018 "Yes" 10,3 "1 to 30" "Primary" "Oropharynx" "III" "2" "1" 0 "multi" "HPV16" "DNA+RNA+" 657 FALSE 657 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_239" "GW_239 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_239 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_239" "M" 60,5475701574264 "Yes" 45 ">60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "mono" "Negative" "DNA-" 366 TRUE 366 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_240" "GW_240 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_240 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_240" "M" 69,8617385352498 "Yes" 60 "31 to 60" "Primary" "Oropharynx" "IVB" "4a" "3" 0 "multi" "HPV16" "DNA+RNA+" 611 TRUE 611 TRUE "Atypical IR 1" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_241" "GW_241 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_241 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_241" "M" 61,3497604380561 "Yes" 40 "31 to 60" "Primary" "Oropharynx" "II" "2" "0" 0 "multi" "HPV16" "DNA+RNA-" 665 FALSE 665 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_242" "GW_242 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_242 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_242" "M" 68,9363449691992 "Yes" 50 "31 to 60" "Primary" "Oropharynx" "IVA" "1" "2b" 0 "mono" "HPV16" "DNA+RNA-" 701 FALSE 330 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_243" "GW_243 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_243 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_243" "M" 58,3381245722108 "Yes" 15 "no" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "mono" "HPV16" "DNA+RNA+" 657 FALSE 657 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_244" "GW_244 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_244 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_244" "F" 70,113620807666 "Yes" 50 "no" "Primary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 632 FALSE 632 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_245" "GW_245 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_245 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_245" "M" 78,8090349075975 "Yes" 38 ">60" "Primary" "Oropharynx" "IVA" "1" "2c" 0 "mono" "Negative" "DNA-" 161 TRUE 161 TRUE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_246" "GW_246 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_246 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_246" "M" 58,7049965776865 "Yes" 40 ">60" "Primary" "Oropharynx" "IVC" "3" "3" 1 "multi" "Negative" "DNA-" 415 TRUE 189 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_247" "GW_247 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_247 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_247" "M" 76,0766598220397 "Yes" 25 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "1" 0 "mono" "Negative" "DNA-" 619 FALSE 619 FALSE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_248" "GW_248 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_248 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_248" "M" 54,3162217659138 "No" 0 "31 to 60" "Primary" "Oropharynx" "IVA" "2" "2b" 0 "multi" "HPV16" "DNA+RNA+" 605 FALSE 605 FALSE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_249" "GW_249 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_249 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_249" "F" 85,719370294319 "No" 0 "1 to 30" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "palliative" "Negative" "DNA-" 652 FALSE 652 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_250" "GW_250 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_250 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_250" "M" 60,1177275838467 "Yes" 60 ">60" "Primary" "Larynx" "II" "2" "0" 0 "multi" "Negative" "DNA-" 643 FALSE 643 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_251" "GW_251 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_251 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_251" "M" 49,2128678986995 "Yes" 45 "1 to 30" "Primary" "Hypopharynx" "IVA" "4a" "2c" 0 "multi" "HPV16" "DNA+RNA-" 603 FALSE 603 FALSE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_253" "GW_253 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_253 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_253" "F" 69,9958932238193 "No" 0 ">60" "Primary" "Hypopharynx" "IVA" "4a" "0" 0 "multi" "Other HPV" NA 1210 TRUE 159 TRUE "Mesenchymal 3" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_255" "GW_255 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_255 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_255" "M" 85,6454483230664 "Yes" 25 "no" "Relapse" "Hypopharynx" "II" "2" "0" 0 "multi" "Negative" "DNA-" 510 TRUE 510 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_256" "GW_256 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_256 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_256" "M" 55,3264887063655 "Yes" 30 "31 to 60" "Secondary" "Hypopharynx" "I" "1" "0" 0 "multi" "Negative" "DNA-" 662 TRUE 662 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_257" "GW_257 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_257 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_257" "M" 69,8973305954825 "Yes" 40 ">60" "Secondary" "Hypopharynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 188 TRUE 188 TRUE "Classical 2" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_258" "GW_258 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_258 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_258" "M" 70,0506502395619 "Yes" 30 "1 to 30" "Secondary" "Cavum Oris" "IVA" "4a" "0" 0 "mono" "Negative" "DNA-" 46 TRUE 46 TRUE "Atypical IR 1" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_262" "GW_262 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_262 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_262" "M" 66,8884325804244 "Yes" 60 "31 to 60" "Secondary" "Larynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 783 FALSE 364 TRUE "Classical 2" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_263" "GW_263 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_263 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_263" "M" 74,3572895277207 "Yes" 55 "31 to 60" "Secondary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 1067 FALSE 1067 FALSE "Mesenchymal 3" 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_265" "GW_265 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_265 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_265" "M" 62,6721423682409 "Yes" 50 ">60" "Secondary" "Larynx" "IVC" "3" "0" 1 "mono" "Negative" "DNA-" 344 TRUE 289 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_266" "GW_266 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_266 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_266" "F" 62,5653661875428 "Yes" 10 "no" "Secondary" "Larynx" "III" "3" "0" 0 "multi" "Negative" "DNA-" 833 FALSE 760 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_268" "GW_268 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_268 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_268" "M" 57,8425735797399 "Yes" 160 ">60" "Secondary" "Cavum Oris" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 805 FALSE 603 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_269" "GW_269 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_269 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_269" "F" 87,0444900752909 "No" 0 "1 to 30" "Relapse" "Cavum Oris" "III" "3" "0" 0 "multi" "Negative" "DNA-" 154 TRUE 154 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_271" "GW_271 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_271 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_271" "M" 67,605749486653 "Yes" 34 "1 to 30" "Secondary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 734 FALSE 725 TRUE "Classical 2" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_272" "GW_272 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_272 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_272" "F" 50,7268993839836 "Yes" 30 "31 to 60" "Relapse" "Hypopharynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 198 TRUE 193 TRUE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_275" "GW_275 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_275 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_275" "M" 52,6242299794661 "Yes" 18 "no" "Primary" NA "IVA" "3" "2a" 0 "mono" "Negative" "DNA-" 578 TRUE 578 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_280" "GW_280 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_280 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_280" "M" 49,9876796714579 "Yes" 30 ">60" "Primary" "Oropharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 346 TRUE 346 TRUE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_281" "GW_281 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_281 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_281" "M" 38,1437371663244 "Yes" 17 "1 to 30" "Primary" "Cavum Oris" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 596 FALSE 404 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_282" "GW_282 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_282 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_282" "M" 50,4640657084189 "Yes" 15 ">60" "Primary" "Oropharynx" "IVA" "4a" "0" 0 "multi" "Negative" "DNA-" 590 FALSE 590 FALSE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_283" "GW_283 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_283 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_283" "M" 41,6892539356605 "Yes" 20,3 "31 to 60" "Primary" "Cavum Oris" "IVA" "4a" "2c" 0 "multi" "HPV16" "DNA+RNA-" 596 FALSE 596 FALSE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_284" "GW_284 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_284 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_284" "M" 71,2388774811773 "Yes" 40 "1 to 30" "Primary" "Oropharynx" "IVA" "2" "2b" 0 "multi" "Negative" "DNA-" 358 TRUE 311 TRUE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_285" "GW_285 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_285 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_285" "M" 52,2847364818617 "Yes" 30 "1 to 30" "Primary" "Oropharynx" "II" "2" "0" 0 "mono" "HPV16" "DNA+RNA+" 590 FALSE 590 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_286" "GW_286 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_286 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_286" "M" 53,7577002053388 "Yes" 30 "31 to 60" "Primary" "Cavum Oris" "I" "1" "0" 0 "palliative" "Negative" "DNA-" 582 FALSE 582 FALSE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_287" "GW_287 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_287 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_287" "M" 59,1485284052019 "No" 0 "1 to 30" "Primary" "Oropharynx" "III" "3" "1" 0 "mono" "Negative" "DNA-" 581 FALSE 581 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_288" "GW_288 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_288 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_288" "F" 73,3853524982888 "Yes" 7,5 "1 to 30" "Primary" "Oropharynx" "IVA" "1" "2c" 0 "multi" "Negative" "DNA-" 553 FALSE 553 FALSE "Basal 4" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_289" "GW_289 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_289 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_289" "M" 51,6112251882272 "Yes" 35 ">60" "Primary" "Cavum Oris" "IVA" "1" "2c" 0 "multi" "Negative" "DNA-" 574 FALSE 574 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_290" "GW_290 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_290 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_290" "M" 56,2518822724162 "Yes" 40 ">60" "Primary" "Hypopharynx" "III" "2" "1" 0 "mono" "Negative" "DNA-" 605 FALSE 132 TRUE "Classical 2" 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_292" "GW_292 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_292 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_292" "F" 55,4469541409993 "Yes" 7,5 "1 to 30" "Primary" "Oropharynx" "IVA" "4a" "0" 0 "multi" "Other HPV" NA 603 FALSE 603 FALSE "Mesenchymal 3" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_293" "GW_293 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_293 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_293" "M" 53,6974674880219 "Yes" 60 "1 to 30" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 582 FALSE 582 FALSE "Classical 2" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_294" "GW_294 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_294 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_294" "M" 45,9822039698836 "No" 0 "1 to 30" "Primary" "Hypopharynx" "IVA" "2" "2a" 0 "multi" "HPV16" "DNA+RNA+" 577 FALSE 577 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_295" "GW_295 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_295 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_295" "M" 72,9390828199863 "Yes" 1 "1 to 30" "Primary" "Oropharynx" "IVA" "3" "2b" 0 "multi" "HPV16" "DNA+RNA-" 20 TRUE 20 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_296" "GW_296 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_296 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_296" "M" 47,9507186858316 "Yes" 13,5 ">60" "Primary" "Hypopharynx" "IVA" "4a" "2b" 0 "multi" "Negative" "DNA-" 566 FALSE 566 FALSE "Classical 2" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_297" "GW_297 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_297 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_297" "M" 43,2799452429843 "Yes" 40 "1 to 30" "Primary" "Cavum Oris" "III" "1" "1" 0 "mono" "Negative" "DNA-" 596 FALSE 271 TRUE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_298" "GW_298 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_298 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_298" "M" 58,031485284052 "Yes" 35 ">60" "Primary" "Cavum Oris" "IVA" "4a" "2a" 0 "mono" "Negative" "DNA-" 672 FALSE 249 TRUE "Mesenchymal 3" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_299" "GW_299 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_299 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_299" "F" 64,0766598220397 "Yes" 7,5 "1 to 30" "Primary" "Larynx" "IVA" "4a" "2c" 0 "mono" "Negative" "DNA-" 552 FALSE 552 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Non-disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_300" "GW_300 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_300 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_300" "M" 44,7173169062286 "No" 0 "no" "Primary" NA "IVB" "4b" "2c" 0 "multi" "Negative" "DNA-" 549 FALSE 549 FALSE "Atypical IR 1" 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_301" "GW_301 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_301 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_301" "F" 44,8870636550308 "No" 0 "no" "Secondary" NA "IVB" "4b" "0" 0 "multi" "Negative" "DNA-" 546 FALSE 476 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_302" "GW_302 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_302 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_302" "M" 51,4250513347023 "Yes" 61 "31 to 60" "Primary" "Cavum Oris" "II" "2" "0" 0 "mono" "Negative" "DNA-" 563 FALSE 563 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558" "GW_303" "GW_303 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_303 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_303" "M" 51,7973990417522 "Yes" 45 "31 to 60" "Primary" "Larynx" "II" "2" "0" 0 "mono" "Negative" "DNA-" 623 FALSE 623 FALSE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_305" "GW_305 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_305 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_305" "M" 74,4969199178645 "Yes" 44 "31 to 60" "Primary" "Larynx" "IVA" "3" "2b" 0 "multi" "Negative" "DNA-" 597 FALSE 597 FALSE "Atypical IR 1" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "WT" 0 "total RNA" "biotin" "" "GPL10558" "GW_306" "GW_306 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_306 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_306" "M" 59,3593429158111 "Yes" 40 ">60" "Secondary" "Oropharynx" "I" "1" "0" 0 "multi" "Negative" "DNA-" 11 TRUE 11 TRUE "Atypical IR 1" NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA "total RNA" "biotin" "" "GPL10558" "GW_307" "GW_307 Head and neck squamous cell carcinoma Illumina HT12v4" "GW_307 Head and neck squamous cell carcinoma" "Homo sapiens" "" "GW_307" "M" 61,3990417522245 "No" 0 "1 to 30" "Secondary" "Cavum Oris" "II" "2" "0" 0 "multi" "Negative" "DNA-" 577 FALSE 162 TRUE "Basal 4" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 "Disruptive" 0 "total RNA" "biotin" "" "GPL10558"